mariadb: Upgrade to 10.3.13

Per https://mariadb.org/about/maintenance-policy/,
mariadb 5.5.x series only supported until next year
April 2020, so upgrade it to 10.3.13.

Remove some deprecated patches, add some
new patches to fix build failure and rework
two patches to avoid fuzz warnings.

Add -latomic to linker flags for armv5

Use -pthread to link for mussing  atomic symbols on arches e.g. riscv

Fixes issues like
ld.bfd: librocksdblib.a(memtable.cc.o):/usr/include/c++/9.0.1/bits/atomic_base.h:438: more undefined references to `__atomic_compare_exchange_1' follow

Fix build with musl

add libxml2 to depends

Fix build with clang

Signed-off-by: Mingli Yu <mingli.yu@windriver.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>

1 files changed, 0 insertions, 18 deletions

diff --git a/meta-oe/recipes-dbs/mysql/mariadb/remove-bad-path.patch b/meta-oe/recipes-dbs/mysql/mariadb/remove-bad-path.patch
deleted file mode 100644
index ff26b0b86c..0000000000
--- a/meta-oe/recipes-dbs/mysql/mariadb/remove-bad-path.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Remove host path from include directories
-
-Naturally this breaks cross-compilation if present.
-
-Upstream-Status: Pending
-
-Signed-off-by: Paul Eggleton <paul.eggleton@linux.intel.com>
-
---- mariadb-5.5.38/storage/tokudb/ft-index/CMakeLists.txt       2014-07-17 14:37:04.529327998 +0100
-+++ mariadb-5.5.38/storage/tokudb/ft-index/CMakeLists.txt       2014-07-17 14:43:56.991337895 +0100
-@@ -39,7 +39,6 @@
- 
- ## default includes and libraries
- include_directories(SYSTEM
--  /usr/local/include
-   ${ZLIB_INCLUDE_DIRS}
-   )
-