Merge branch 'stable'

* stable: (33 commits)
  Added feature to print a <notice> from manifest at the end of a sync.
  sync: Use --force-broken to continue other projects
  upload: Remove --replace option
  sync --quiet: be more quiet
  sync: Enable use of git clone --reference
  Only delete corrupt pickle config files if they exist
  Don't allow git fetch to start ControlMaster
  Check for existing SSH ControlMaster
  Fix for handling values of EDITOR which contain a space.
  upload: Fix --replace flag
  rebase: Pass through more options
  upload: Allow review.HOST.username to override email
  upload -t: Automatically include local branch name
  Warn users before uploading if there are local changes
  sync: Try fetching a tag as a last resort before giving up
  rebase: Automatically rebase branch on upstrea
  upload: Automatically --cc folks in review.URL.autocopy
  Fix format string bugs in grep
  Do not invoke ssh with -p argument when no port has been specified.
  Allow files to be copied into new folders
  ...

Conflicts:
	git_config.py
	manifest_xml.py
	subcmds/init.py
	subcmds/sync.py
	subcmds/upload.py

Change-Id: I4756a6908277e91505c35287a122a775b68f4df5

7 files changed, 417 insertions, 132 deletions

diff --git a/subcmds/branches.py b/subcmds/branches.py
index 0e3ab3c2..a4f8d360 100644
--- a/subcmds/branches.py
+++ b/subcmds/branches.py
@@ -136,7 +136,7 @@ is shown, then the branch appears in all projects.
       hdr('%c%c %-*s' % (current, published, width, name))
       out.write(' |')
 
-      if in_cnt < project_cnt and (in_cnt == 1):
+      if in_cnt < project_cnt:
         fmt = out.write
         paths = []
         if in_cnt < project_cnt - in_cnt: 
@@ -150,15 +150,17 @@ is shown, then the branch appears in all projects.
           for b in i.projects:
             have.add(b.project)
           for p in projects:
-            paths.append(p.relpath)
+            if not p in have:
+              paths.append(p.relpath)
 
         s = ' %s %s' % (type, ', '.join(paths))
         if width + 7 + len(s) < 80:
           fmt(s)
         else:
-          out.nl()
-          fmt('    %s:' % type)
+          fmt(' %s:' % type)
           for p in paths:
             out.nl()
-            fmt('      %s' % p)
+            fmt(width*' ' + '          %s' % p)
+      else:
+        out.write(' in all projects')
       out.nl()
diff --git a/subcmds/grep.py b/subcmds/grep.py
index 4f714271..1cb5650b 100644
--- a/subcmds/grep.py
+++ b/subcmds/grep.py
@@ -204,7 +204,7 @@ contain a line that matches both expressions:
           else:
             out.project('--- project %s ---' % project.relpath)
             out.nl()
-            out.write(p.stderr)
+            out.write("%s", p.stderr)
             out.nl()
         continue
       have_match = True
@@ -217,17 +217,17 @@ contain a line that matches both expressions:
       if have_rev and full_name:
         for line in r:
           rev, line = line.split(':', 1)
-          out.write(rev)
+          out.write("%s", rev)
           out.write(':')
           out.project(project.relpath)
           out.write('/')
-          out.write(line)
+          out.write("%s", line)
           out.nl()
       elif full_name:
         for line in r:
           out.project(project.relpath)
           out.write('/')
-          out.write(line)
+          out.write("%s", line)
           out.nl()
       else:
         for line in r:
diff --git a/subcmds/init.py b/subcmds/init.py
index cdbbfdf7..2ca4e163 100644
--- a/subcmds/init.py
+++ b/subcmds/init.py
@@ -40,6 +40,17 @@ current working directory.
 The optional -b argument can be used to select the manifest branch
 to checkout and use.  If no branch is specified, master is assumed.
 
+The optional -m argument can be used to specify an alternate manifest
+to be used. If no manifest is specified, the manifest default.xml
+will be used.
+
+The --reference option can be used to point to a directory that
+has the content of a --mirror sync. This will make the working
+directory use as much data as possible from the local reference
+directory when fetching from the server. This will make the sync
+go a lot faster by reducing data traffic on the network.
+
+
 Switching Manifest Branches
 ---------------------------
 
@@ -76,7 +87,9 @@ to update the working directory files.
     g.add_option('--mirror',
                  dest='mirror', action='store_true',
                  help='mirror the forrest')
-
+    g.add_option('--reference',
+                 dest='reference',
+                 help='location of mirror directory', metavar='DIR')
 
     # Tool
     g = p.add_option_group('repo Version options')
@@ -132,6 +145,9 @@ to update the working directory files.
       r.ResetFetch()
       r.Save()
 
+    if opt.reference:
+      m.config.SetString('repo.reference', opt.reference)
+
     if opt.mirror:
       if is_new:
         m.config.SetString('repo.mirror', 'true')
@@ -162,7 +178,11 @@ to update the working directory files.
     syncbuf = SyncBuffer(m.config)
     m.Sync_LocalHalf(syncbuf)
     syncbuf.Finish()
+
+    if isinstance(self.manifest, XmlManifest):
+      self._LinkManifest(opt.manifest_name)
     _ReloadManifest(self)
+
     self._ApplyOptions(opt, is_new)
 
     if not self.manifest.InitBranch():
@@ -200,8 +220,9 @@ to update the working directory files.
 
       print ''
       print 'Your identity is: %s <%s>' % (name, email)
-      sys.stdout.write('is this correct [yes/no]? ')
-      if 'yes' == sys.stdin.readline().strip():
+      sys.stdout.write('is this correct [y/n]? ')
+      a = sys.stdin.readline().strip()
+      if a in ('yes', 'y', 't', 'true'):
         break
 
     if name != mp.UserName:
@@ -249,8 +270,6 @@ to update the working directory files.
   def Execute(self, opt, args):
     git_require(MIN_GIT_VERSION, fail=True)
     self._SyncManifest(opt)
-    if isinstance(self.manifest, XmlManifest):
-      self._LinkManifest(opt.manifest_name)
 
     if os.isatty(0) and os.isatty(1) and not self.manifest.IsMirror:
       self._ConfigureUser()
diff --git a/subcmds/rebase.py b/subcmds/rebase.py
new file mode 100644
index 00000000..e341296d
--- /dev/null
+++ b/subcmds/rebase.py
@@ -0,0 +1,107 @@
+#
+# Copyright (C) 2010 The Android Open Source Project
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+import sys
+
+from command import Command
+from git_command import GitCommand
+from git_refs import GitRefs, HEAD, R_HEADS, R_TAGS, R_PUB
+from error import GitError
+
+class Rebase(Command):
+  common = True
+  helpSummary = "Rebase local branches on upstream branch"
+  helpUsage = """
+%prog {[<project>...] | -i <project>...}
+"""
+  helpDescription = """
+'%prog' uses git rebase to move local changes in the current topic branch to
+the HEAD of the upstream history, useful when you have made commits in a topic
+branch but need to incorporate new upstream changes "underneath" them.
+"""
+
+  def _Options(self, p):
+    p.add_option('-i', '--interactive',
+                dest="interactive", action="store_true",
+                help="interactive rebase (single project only)")
+
+    p.add_option('-f', '--force-rebase',
+                 dest='force_rebase', action='store_true',
+                 help='Pass --force-rebase to git rebase')
+    p.add_option('--no-ff',
+                 dest='no_ff', action='store_true',
+                 help='Pass --no-ff to git rebase')
+    p.add_option('-q', '--quiet',
+                 dest='quiet', action='store_true',
+                 help='Pass --quiet to git rebase')
+    p.add_option('--autosquash',
+                 dest='autosquash', action='store_true',
+                 help='Pass --autosquash to git rebase')
+    p.add_option('--whitespace',
+                 dest='whitespace', action='store', metavar='WS',
+                 help='Pass --whitespace to git rebase')
+
+  def Execute(self, opt, args):
+    all = self.GetProjects(args)
+    one_project = len(all) == 1
+
+    if opt.interactive and not one_project:
+      print >>sys.stderr, 'error: interactive rebase not supported with multiple projects'
+      return -1
+
+    for project in all:
+      cb = project.CurrentBranch
+      if not cb:
+        if one_project:
+          print >>sys.stderr, "error: project %s has a detatched HEAD" % project.relpath
+          return -1
+        # ignore branches with detatched HEADs
+        continue
+
+      upbranch = project.GetBranch(cb)
+      if not upbranch.LocalMerge:
+        if one_project:
+          print >>sys.stderr, "error: project %s does not track any remote branches" % project.relpath
+          return -1
+        # ignore branches without remotes
+        continue
+
+      args = ["rebase"]
+
+      if opt.whitespace:
+        args.append('--whitespace=%s' % opt.whitespace)
+
+      if opt.quiet:
+        args.append('--quiet')
+
+      if opt.force_rebase:
+        args.append('--force-rebase')
+
+      if opt.no_ff:
+        args.append('--no-ff')
+
+      if opt.autosquash:
+        args.append('--autosquash')
+
+      if opt.interactive:
+        args.append("-i")
+
+      args.append(upbranch.LocalMerge)
+
+      print >>sys.stderr, '# %s: rebasing %s -> %s' % \
+        (project.relpath, cb, upbranch.LocalMerge)
+
+      if GitCommand(project, args).Wait() != 0:
+        return -1
diff --git a/subcmds/smartsync.py b/subcmds/smartsync.py
new file mode 100644
index 00000000..1edbd35b
--- /dev/null
+++ b/subcmds/smartsync.py
@@ -0,0 +1,33 @@
+#
+# Copyright (C) 2010 The Android Open Source Project
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from sync import Sync
+
+class Smartsync(Sync):
+  common = True
+  helpSummary = "Update working tree to the latest known good revision"
+  helpUsage = """
+%prog [<project>...]
+"""
+  helpDescription = """
+The '%prog' command is a shortcut for sync -s.
+"""
+
+  def _Options(self, p):
+    Sync._Options(self, p, show_smart=False)
+
+  def Execute(self, opt, args):
+    opt.smart_sync = True
+    Sync.Execute(self, opt, args)
diff --git a/subcmds/sync.py b/subcmds/sync.py
index d89c2b8c..7b77388b 100644
--- a/subcmds/sync.py
+++ b/subcmds/sync.py
@@ -17,11 +17,19 @@ from optparse import SUPPRESS_HELP
 import os
 import re
 import shutil
+import socket
 import subprocess
 import sys
 import time
+import xmlrpclib
+
+try:
+  import threading as _threading
+except ImportError:
+  import dummy_threading as _threading
 
 from git_command import GIT
+from git_refs import R_HEADS
 from project import HEAD
 from project import Project
 from project import RemoteSpec
@@ -32,6 +40,7 @@ from project import SyncBuffer
 from progress import Progress
 
 class Sync(Command, MirrorSafeCommand):
+  jobs = 1
   common = True
   helpSummary = "Update working tree to the latest revision"
   helpUsage = """
@@ -57,6 +66,13 @@ back to the manifest revision.  This option is especially helpful
 if the project is currently on a topic branch, but the manifest
 revision is temporarily needed.
 
+The -s/--smart-sync option can be used to sync to a known good
+build as specified by the manifest-server element in the current
+manifest.
+
+The -f/--force-broken option can be used to proceed with syncing
+other projects if a project sync fails.
+
 SSH Connections
 ---------------
 
@@ -87,7 +103,10 @@ later is required to fix a server side protocol bug.
 
 """
 
-  def _Options(self, p):
+  def _Options(self, p, show_smart=True):
+    p.add_option('-f', '--force-broken',
+                 dest='force_broken', action='store_true',
+                 help="continue sync even if a project fails to sync")
     p.add_option('-l','--local-only',
                  dest='local_only', action='store_true',
                  help="only update working tree, don't fetch")
@@ -97,6 +116,16 @@ later is required to fix a server side protocol bug.
     p.add_option('-d','--detach',
                  dest='detach_head', action='store_true',
                  help='detach projects back to manifest revision')
+    p.add_option('-q','--quiet',
+                 dest='quiet', action='store_true',
+                 help='be more quiet')
+    p.add_option('-j','--jobs',
+                 dest='jobs', action='store', type='int',
+                 help="number of projects to fetch simultaneously")
+    if show_smart:
+      p.add_option('-s', '--smart-sync',
+                   dest='smart_sync', action='store_true',
+                   help='smart sync using manifest from a known good build')
 
     g = p.add_option_group('repo Version options')
     g.add_option('--no-repo-verify',
@@ -106,16 +135,55 @@ later is required to fix a server side protocol bug.
                  dest='repo_upgraded', action='store_true',
                  help=SUPPRESS_HELP)
 
-  def _Fetch(self, projects):
+  def _FetchHelper(self, opt, project, lock, fetched, pm, sem):
+      if not project.Sync_NetworkHalf(quiet=opt.quiet):
+        print >>sys.stderr, 'error: Cannot fetch %s' % project.name
+        if opt.force_broken:
+          print >>sys.stderr, 'warn: --force-broken, continuing to sync'
+        else:
+          sem.release()
+          sys.exit(1)
+
+      lock.acquire()
+      fetched.add(project.gitdir)
+      pm.update()
+      lock.release()
+      sem.release()
+
+  def _Fetch(self, projects, opt):
     fetched = set()
     pm = Progress('Fetching projects', len(projects))
-    for project in projects:
-      pm.update()
-      if project.Sync_NetworkHalf():
-        fetched.add(project.gitdir)
-      else:
-        print >>sys.stderr, 'error: Cannot fetch %s' % project.name
-        sys.exit(1)
+
+    if self.jobs == 1:
+      for project in projects:
+        pm.update()
+        if project.Sync_NetworkHalf(quiet=opt.quiet):
+          fetched.add(project.gitdir)
+        else:
+          print >>sys.stderr, 'error: Cannot fetch %s' % project.name
+          if opt.force_broken:
+            print >>sys.stderr, 'warn: --force-broken, continuing to sync'
+          else:
+            sys.exit(1)
+    else:
+      threads = set()
+      lock = _threading.Lock()
+      sem = _threading.Semaphore(self.jobs)
+      for project in projects:
+        sem.acquire()
+        t = _threading.Thread(target = self._FetchHelper,
+                              args = (opt,
+                                      project,
+                                      lock,
+                                      fetched,
+                                      pm,
+                                      sem))
+        threads.add(t)
+        t.start()
+
+      for t in threads:
+        t.join()
+
     pm.end()
     for project in projects:
       project.bare_git.gc('--auto')
@@ -140,32 +208,36 @@ later is required to fix a server side protocol bug.
         if not path:
           continue
         if path not in new_project_paths:
-          project = Project(
-                         manifest = self.manifest,
-                         name = path,
-                         remote = RemoteSpec('origin'),
-                         gitdir = os.path.join(self.manifest.topdir,
-                                               path, '.git'),
-                         worktree = os.path.join(self.manifest.topdir, path),
-                         relpath = path,
-                         revisionExpr = 'HEAD',
-                         revisionId = None)
-          if project.IsDirty():
-            print >>sys.stderr, 'error: Cannot remove project "%s": \
+          """If the path has already been deleted, we don't need to do it
+          """
+          if os.path.exists(self.manifest.topdir + '/' + path):
+              project = Project(
+                             manifest = self.manifest,
+                             name = path,
+                             remote = RemoteSpec('origin'),
+                             gitdir = os.path.join(self.manifest.topdir,
+                                                   path, '.git'),
+                             worktree = os.path.join(self.manifest.topdir, path),
+                             relpath = path,
+                             revisionExpr = 'HEAD',
+                             revisionId = None)
+
+              if project.IsDirty():
+                print >>sys.stderr, 'error: Cannot remove project "%s": \
 uncommitted changes are present' % project.relpath
-            print >>sys.stderr, '       commit changes, then run sync again'
-            return -1
-          else:
-            print >>sys.stderr, 'Deleting obsolete path %s' % project.worktree
-            shutil.rmtree(project.worktree)
-            # Try deleting parent subdirs if they are empty
-            dir = os.path.dirname(project.worktree)
-            while dir != self.manifest.topdir:
-              try:
-                os.rmdir(dir)
-              except OSError:
-                break
-              dir = os.path.dirname(dir)
+                print >>sys.stderr, '       commit changes, then run sync again'
+                return -1
+              else:
+                print >>sys.stderr, 'Deleting obsolete path %s' % project.worktree
+                shutil.rmtree(project.worktree)
+                # Try deleting parent subdirs if they are empty
+                dir = os.path.dirname(project.worktree)
+                while dir != self.manifest.topdir:
+                  try:
+                    os.rmdir(dir)
+                  except OSError:
+                    break
+                  dir = os.path.dirname(dir)
 
     new_project_paths.sort()
     fd = open(file_path, 'w')
@@ -177,6 +249,8 @@ uncommitted changes are present' % project.relpath
     return 0
 
   def Execute(self, opt, args):
+    if opt.jobs:
+      self.jobs = opt.jobs
     if opt.network_only and opt.detach_head:
       print >>sys.stderr, 'error: cannot combine -n and -d'
       sys.exit(1)
@@ -184,6 +258,51 @@ uncommitted changes are present' % project.relpath
       print >>sys.stderr, 'error: cannot combine -n and -l'
       sys.exit(1)
 
+    if opt.smart_sync:
+      if not self.manifest.manifest_server:
+        print >>sys.stderr, \
+            'error: cannot smart sync: no manifest server defined in manifest'
+        sys.exit(1)
+      try:
+        server = xmlrpclib.Server(self.manifest.manifest_server)
+        p = self.manifest.manifestProject
+        b = p.GetBranch(p.CurrentBranch)
+        branch = b.merge
+        if branch.startswith(R_HEADS):
+          branch = branch[len(R_HEADS):]
+
+        env = dict(os.environ)
+        if (env.has_key('TARGET_PRODUCT') and
+            env.has_key('TARGET_BUILD_VARIANT')):
+          target = '%s-%s' % (env['TARGET_PRODUCT'],
+                              env['TARGET_BUILD_VARIANT'])
+          [success, manifest_str] = server.GetApprovedManifest(branch, target)
+        else:
+          [success, manifest_str] = server.GetApprovedManifest(branch)
+
+        if success:
+          manifest_name = "smart_sync_override.xml"
+          manifest_path = os.path.join(self.manifest.manifestProject.worktree,
+                                       manifest_name)
+          try:
+            f = open(manifest_path, 'w')
+            try:
+              f.write(manifest_str)
+            finally:
+              f.close()
+          except IOError:
+            print >>sys.stderr, 'error: cannot write manifest to %s' % \
+                manifest_path
+            sys.exit(1)
+          self.manifest.Override(manifest_name)
+        else:
+          print >>sys.stderr, 'error: %s' % manifest_str
+          sys.exit(1)
+      except socket.error:
+        print >>sys.stderr, 'error: cannot connect to manifest server %s' % (
+            self.manifest.manifest_server)
+        sys.exit(1)
+
     rp = self.manifest.repoProject
     rp.PreSync()
 
@@ -194,7 +313,7 @@ uncommitted changes are present' % project.relpath
       _PostRepoUpgrade(self.manifest)
 
     if not opt.local_only:
-      mp.Sync_NetworkHalf()
+      mp.Sync_NetworkHalf(quiet=opt.quiet)
 
     if mp.HasChanges:
       syncbuf = SyncBuffer(mp.config)
@@ -211,7 +330,7 @@ uncommitted changes are present' % project.relpath
         to_fetch.append(rp)
       to_fetch.extend(all)
 
-      fetched = self._Fetch(to_fetch)
+      fetched = self._Fetch(to_fetch, opt)
       _PostRepoFetch(rp, opt.no_repo_verify)
       if opt.network_only:
         # bail out now; the rest touches the working tree
@@ -230,7 +349,7 @@ uncommitted changes are present' % project.relpath
         for project in all:
           if project.gitdir not in fetched:
             missing.append(project)
-        self._Fetch(missing)
+        self._Fetch(missing, opt)
 
     if self.manifest.IsMirror:
       # bail out now, we have no working tree
@@ -258,6 +377,9 @@ def _ReloadManifest(cmd):
   if old.__class__ != new.__class__:
     print >>sys.stderr, 'NOTICE: manifest format has changed  ***'
     new.Upgrade_Local(old)
+  else:
+    if new.notice:
+      print new.notice
 
 def _PostRepoUpgrade(manifest):
   for project in manifest.projects.values():
diff --git a/subcmds/upload.py b/subcmds/upload.py
index 2ab6a484..20822096 100644
--- a/subcmds/upload.py
+++ b/subcmds/upload.py
@@ -13,6 +13,7 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+import copy
 import re
 import sys
 
@@ -20,6 +21,17 @@ from command import InteractiveCommand
 from editor import Editor
 from error import UploadError
 
+UNUSUAL_COMMIT_THRESHOLD = 5
+
+def _ConfirmManyUploads(multiple_branches=False):
+  if multiple_branches:
+    print "ATTENTION: One or more branches has an unusually high number of commits."
+  else:
+    print "ATTENTION: You are uploading an unusually high number of commits."
+  print "YOU PROBABLY DO NOT MEAN TO DO THIS. (Did you rebase across branches?)"
+  answer = raw_input("If you are sure you intend to do this, type 'yes': ").strip()
+  return answer == "yes"
+
 def _die(fmt, *args):
   msg = fmt % args
   print >>sys.stderr, 'error: %s' % msg
@@ -35,7 +47,7 @@ class Upload(InteractiveCommand):
   common = True
   helpSummary = "Upload changes for code review"
   helpUsage="""
-%prog [--re --cc] {[<project>]... | --replace <project>}
+%prog [--re --cc] [<project>]...
 """
   helpDescription = """
 The '%prog' command is used to send changes to the Gerrit Code
@@ -55,12 +67,6 @@ added to the respective list of users, and emails are sent to any
 new users.  Users passed as --reviewers must already be registered
 with the code review system, or the upload will fail.
 
-If the --replace option (deprecated) is passed the user can designate
-which existing change(s) in Gerrit match up to the commits in the
-branch being uploaded.  For each matched pair of change,commit the
-commit will be added as a new patch set, completely replacing the
-set of files and description associated with the change in Gerrit.
-
 Configuration
 -------------
 
@@ -72,6 +78,19 @@ to "true" then repo will assume you always answer "y" at the prompt,
 and will not prompt you further.  If it is set to "false" then repo
 will assume you always answer "n", and will abort.
 
+review.URL.autocopy:
+
+To automatically copy a user or mailing list to all uploaded reviews,
+you can set a per-project or global Git option to do so. Specifically,
+review.URL.autocopy can be set to a comma separated list of reviewers
+who you always want copied on all uploads with a non-empty --re
+argument.
+
+review.URL.username:
+
+Override the username used to connect to Gerrit Code Review.
+By default the local part of the email address is used.
+
 The URL must match the review URL listed in the manifest XML file,
 or in the .git/config within the project.  For example:
 
@@ -81,6 +100,7 @@ or in the .git/config within the project.  For example:
 
   [review "http://review.example.com/"]
     autoupload = true
+    autocopy = johndoe@company.com,my-team-alias@company.com
 
 References
 ----------
@@ -90,9 +110,9 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
 """
 
   def _Options(self, p):
-    p.add_option('--replace',
-                 dest='replace', action='store_true',
-                 help='Upload replacement patchsets from this branch (deprecated)')
+    p.add_option('-t',
+                 dest='auto_topic', action='store_true',
+                 help='Send local branch name to Gerrit Code Review')
     p.add_option('--re', '--reviewers',
                  type='string',  action='append', dest='reviewers',
                  help='Request reviews from these people.')
@@ -100,7 +120,7 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
                  type='string',  action='append', dest='cc',
                  help='Also send email to these email addresses.')
 
-  def _SingleBranch(self, branch, people):
+  def _SingleBranch(self, opt, branch, people):
     project = branch.project
     name = branch.name
     remote = project.GetBranch(name).remote
@@ -129,11 +149,15 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
       answer = answer in ('y', 'Y', 'yes', '1', 'true', 't')
 
     if answer:
-      self._UploadAndReport([branch], people)
+      if len(branch.commits) > UNUSUAL_COMMIT_THRESHOLD:
+        answer = _ConfirmManyUploads()
+
+    if answer:
+      self._UploadAndReport(opt, [branch], people)
     else:
       _die("upload aborted by user")
 
-  def _MultipleBranches(self, pending, people):
+  def _MultipleBranches(self, opt, pending, people):
     projects = {}
     branches = {}
 
@@ -192,7 +216,30 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
         todo.append(branch)
     if not todo:
       _die("nothing uncommented for upload")
-    self._UploadAndReport(todo, people)
+
+    many_commits = False
+    for branch in todo:
+      if len(branch.commits) > UNUSUAL_COMMIT_THRESHOLD:
+        many_commits = True
+        break
+    if many_commits:
+      if not _ConfirmManyUploads(multiple_branches=True):
+        _die("upload aborted by user")
+
+    self._UploadAndReport(opt, todo, people)
+
+  def _AppendAutoCcList(self, branch, people):
+    """
+    Appends the list of users in the CC list in the git project's config if a
+    non-empty reviewer list was found.
+    """
+
+    name = branch.name
+    project = branch.project
+    key = 'review.%s.autocopy' % project.GetBranch(name).remote.review
+    raw_list = project.config.GetString(key)
+    if not raw_list is None and len(people[0]) > 0:
+      people[1].extend([entry.strip() for entry in raw_list.split(',')])
 
   def _FindGerritChange(self, branch):
     last_pub = branch.project.WasPublished(branch.name)
@@ -206,66 +253,29 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
     except:
       return ""
 
-  def _ReplaceBranch(self, project, people):
-    branch = project.CurrentBranch
-    if not branch:
-      print >>sys.stdout, "no branches ready for upload"
-      return
-    branch = project.GetUploadableBranch(branch)
-    if not branch:
-      print >>sys.stdout, "no branches ready for upload"
-      return
-
-    script = []
-    script.append('# Replacing from branch %s' % branch.name)
-
-    if len(branch.commits) == 1:
-      change = self._FindGerritChange(branch)
-      script.append('[%-6s] %s' % (change, branch.commits[0]))
-    else:
-      for commit in branch.commits:
-        script.append('[      ] %s' % commit)
-
-    script.append('')
-    script.append('# Insert change numbers in the brackets to add a new patch set.')
-    script.append('# To create a new change record, leave the brackets empty.')
-
-    script = Editor.EditString("\n".join(script)).split("\n")
-
-    change_re = re.compile(r'^\[\s*(\d{1,})\s*\]\s*([0-9a-f]{1,}) .*$')
-    to_replace = dict()
-    full_hashes = branch.unabbrev_commits
-
-    for line in script:
-      m = change_re.match(line)
-      if m:
-        c = m.group(1)
-        f = m.group(2)
-        try:
-          f = full_hashes[f]
-        except KeyError:
-          print 'fh = %s' % full_hashes
-          print >>sys.stderr, "error: commit %s not found" % f
-          sys.exit(1)
-        if c in to_replace:
-          print >>sys.stderr,\
-            "error: change %s cannot accept multiple commits" % c
-          sys.exit(1)
-        to_replace[c] = f
-
-    if not to_replace:
-      print >>sys.stderr, "error: no replacements specified"
-      print >>sys.stderr, "       use 'repo upload' without --replace"
-      sys.exit(1)
-
-    branch.replace_changes = to_replace
-    self._UploadAndReport([branch], people)
-
-  def _UploadAndReport(self, todo, people):
+  def _UploadAndReport(self, opt, todo, original_people):
     have_errors = False
     for branch in todo:
       try:
-        branch.UploadForReview(people)
+        people = copy.deepcopy(original_people)
+        self._AppendAutoCcList(branch, people)
+
+        # Check if there are local changes that may have been forgotten
+        if branch.project.HasChanges():
+            key = 'review.%s.autoupload' % branch.project.remote.review
+            answer = branch.project.config.GetBoolean(key)
+
+            # if they want to auto upload, let's not ask because it could be automated
+            if answer is None:
+                sys.stdout.write('Uncommitted changes in ' + branch.project.name + ' (did you forget to amend?). Continue uploading? (y/n) ')
+                a = sys.stdin.readline().strip().lower()
+                if a not in ('y', 'yes', 't', 'true', 'on'):
+                    print >>sys.stderr, "skipping upload"
+                    branch.uploaded = False
+                    branch.error = 'User aborted'
+                    continue
+
+        branch.UploadForReview(people, auto_topic=opt.auto_topic)
         branch.uploaded = True
       except UploadError, e:
         branch.error = e
@@ -309,14 +319,6 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
       cc = _SplitEmails(opt.cc)
     people = (reviewers,cc)
 
-    if opt.replace:
-      if len(project_list) != 1:
-        print >>sys.stderr, \
-              'error: --replace requires exactly one project'
-        sys.exit(1)
-      self._ReplaceBranch(project_list[0], people)
-      return
-
     for project in project_list:
       avail = project.GetUploadableBranches()
       if avail:
@@ -325,6 +327,6 @@ Gerrit Code Review:  http://code.google.com/p/gerrit/
     if not pending:
       print >>sys.stdout, "no branches ready for upload"
     elif len(pending) == 1 and len(pending[0][1]) == 1:
-      self._SingleBranch(pending[0][1][0], people)
+      self._SingleBranch(opt, pending[0][1][0], people)
     else:
-      self._MultipleBranches(pending, people)
+      self._MultipleBranches(opt, pending, people)